Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 DGCR5-201ENST00000399539 862 ntBASIC14.37□□□□□ -0.11
CNIH4Q9P003 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 RPL13AP25-201ENST00000484130 612 ntBASIC14.37□□□□□ -0.11
CNIH4Q9P003 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 CLK3P2-201ENST00000427566 1453 ntBASIC14.37□□□□□ -0.11
CNIH4Q9P003 FAM45BP-202ENST00000592932 1624 ntBASIC14.37□□□□□ -0.11
CNIH4Q9P003 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.37□□□□□ -0.11
CNIH4Q9P003 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNIH4Q9P003 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 FAM86LP-201ENST00000478302 853 ntBASIC14.36□□□□□ -0.11
CNIH4Q9P003 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 AC000095.1-201ENST00000603208 874 ntBASIC14.36□□□□□ -0.11
CNIH4Q9P003 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNIH4Q9P003 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.36□□□□□ -0.11
CNIH4Q9P003 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms