Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 AC098614.1-201ENST00000368528 745 ntBASIC13.33□□□□□ -0.28
TREM2Q9NZC2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 AP006294.1-201ENST00000415407 339 ntBASIC13.33□□□□□ -0.28
TREM2Q9NZC2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 RN7SL752P-201ENST00000463779 287 ntBASIC13.33□□□□□ -0.28
TREM2Q9NZC2 MEIS3P1-201ENST00000495167 958 ntBASIC13.33□□□□□ -0.28
TREM2Q9NZC2 AC055876.2-201ENST00000531834 546 ntBASIC13.33□□□□□ -0.28
TREM2Q9NZC2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TREM2Q9NZC2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 WASH4P-201ENST00000564273 1246 ntBASIC13.32□□□□□ -0.28
TREM2Q9NZC2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 MIR8072-201ENST00000614241 80 ntBASIC13.32□□□□□ -0.28
TREM2Q9NZC2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 CICP20-201ENST00000443330 2801 ntBASIC13.32□□□□□ -0.28
TREM2Q9NZC2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TREM2Q9NZC2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREM2Q9NZC2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms