Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 AP000919.1-202ENST00000581139 1264 ntBASIC18.52■□□□□ 0.56
RNF216Q9NWF9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 AL136981.2-201ENST00000617319 734 ntBASIC18.52■□□□□ 0.56
RNF216Q9NWF9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 AC073342.3-201ENST00000624211 193 ntBASIC18.52■□□□□ 0.56
RNF216Q9NWF9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF216Q9NWF9 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF216Q9NWF9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF216Q9NWF9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF216Q9NWF9 LYSMD4-203ENST00000378904 2122 ntBASIC18.52■□□□□ 0.55
RNF216Q9NWF9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 ZNF839P1-201ENST00000403487 861 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AL355306.1-201ENST00000415580 579 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AC019178.2-201ENST00000423595 505 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 FAM86GP-201ENST00000448322 971 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 RPS26P41-201ENST00000450370 284 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AC108734.3-201ENST00000481241 1165 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AC116562.1-201ENST00000485355 781 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AP004247.1-201ENST00000531556 1289 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AC079315.1-201ENST00000602952 623 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 AP000676.3-201ENST00000623299 569 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 NAP1L6-202ENST00000641404 1222 ntBASIC18.51■□□□□ 0.55
RNF216Q9NWF9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF216Q9NWF9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 SLC9B1P2-201ENST00000398120 1184 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 AL035405.1-201ENST00000400795 710 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 AC211485.1-201ENST00000417100 1107 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 TIMM8BP1-201ENST00000452384 211 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 MTCO1P55-201ENST00000489829 745 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 LTV1P1-201ENST00000510683 1237 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 PVT1-214ENST00000522875 922 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 AC015911.4-201ENST00000588022 1070 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 AC120053.1-201ENST00000607706 736 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 LINC00628-201ENST00000628516 1289 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.5■□□□□ 0.55
RNF216Q9NWF9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF216Q9NWF9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms