RNA–Protein interactions for RNA: ENST00000485355.1

AC116562.1-201, humanhuman

BASIC

Gene AC116562.1, Length 781 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116562.1-201ENST00000485355 AEBP2Q6ZN18 517 aaPredicted RBP28.05■■■□□ 2.08
AC116562.1-201ENST00000485355 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
AC116562.1-201ENST00000485355 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
AC116562.1-201ENST00000485355 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
AC116562.1-201ENST00000485355 FOXD1Q16676 465 aa22.2■■□□□ 1.14
AC116562.1-201ENST00000485355 PLPPR3Q6T4P5 718 aa21.92■■□□□ 1.1
AC116562.1-201ENST00000485355 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
AC116562.1-201ENST00000485355 ADRA2BP18089 450 aa21.06■□□□□ 0.96
AC116562.1-201ENST00000485355 PIAS4Q8N2W9 510 aaPredicted RBP20.88■□□□□ 0.93
AC116562.1-201ENST00000485355 MSH5O43196 834 aa20.66■□□□□ 0.9
AC116562.1-201ENST00000485355 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
AC116562.1-201ENST00000485355 POTEDQ86YR6 584 aa19.33■□□□□ 0.68
AC116562.1-201ENST00000485355 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
AC116562.1-201ENST00000485355 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
AC116562.1-201ENST00000485355 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
AC116562.1-201ENST00000485355 CNKSR2Q8WXI2 1034 aa18.8■□□□□ 0.6
AC116562.1-201ENST00000485355 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
AC116562.1-201ENST00000485355 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
AC116562.1-201ENST00000485355 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
AC116562.1-201ENST00000485355 KCNA4P22459 653 aa18.4■□□□□ 0.54
AC116562.1-201ENST00000485355 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
AC116562.1-201ENST00000485355 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
AC116562.1-201ENST00000485355 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
AC116562.1-201ENST00000485355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.42
AC116562.1-201ENST00000485355 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
AC116562.1-201ENST00000485355 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
AC116562.1-201ENST00000485355 C1QBPQ07021 282 aaKnown RBP17.44■□□□□ 0.38
AC116562.1-201ENST00000485355 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
AC116562.1-201ENST00000485355 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
AC116562.1-201ENST00000485355 U3KPZ7 1027 aaPredicted RBP17.3■□□□□ 0.36
AC116562.1-201ENST00000485355 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
AC116562.1-201ENST00000485355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
AC116562.1-201ENST00000485355 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
AC116562.1-201ENST00000485355 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
AC116562.1-201ENST00000485355 APLP2Q06481 763 aa16.97■□□□□ 0.31
AC116562.1-201ENST00000485355 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
AC116562.1-201ENST00000485355 ZBTB22O15209 634 aa16.9■□□□□ 0.3
AC116562.1-201ENST00000485355 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
AC116562.1-201ENST00000485355 CAPN15O75808 1086 aa16.88■□□□□ 0.29
AC116562.1-201ENST00000485355 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
AC116562.1-201ENST00000485355 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
AC116562.1-201ENST00000485355 DSG3P32926 999 aa16.66■□□□□ 0.26
AC116562.1-201ENST00000485355 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
AC116562.1-201ENST00000485355 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
AC116562.1-201ENST00000485355 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
AC116562.1-201ENST00000485355 ABCB7O75027 752 aa16.51■□□□□ 0.23
AC116562.1-201ENST00000485355 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
AC116562.1-201ENST00000485355 POLA2Q14181 598 aa16.38■□□□□ 0.21
AC116562.1-201ENST00000485355 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
AC116562.1-201ENST00000485355 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
AC116562.1-201ENST00000485355 FBLN2P98095 1184 aa15.93■□□□□ 0.14
AC116562.1-201ENST00000485355 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
AC116562.1-201ENST00000485355 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
AC116562.1-201ENST00000485355 AKT1S1Q96B36 256 aa15.66■□□□□ 0.1
AC116562.1-201ENST00000485355 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
AC116562.1-201ENST00000485355 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
AC116562.1-201ENST00000485355 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
AC116562.1-201ENST00000485355 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
AC116562.1-201ENST00000485355 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
AC116562.1-201ENST00000485355 SSUH2Q9Y2M2 353 aa15.47■□□□□ 0.07
AC116562.1-201ENST00000485355 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
AC116562.1-201ENST00000485355 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
AC116562.1-201ENST00000485355 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
AC116562.1-201ENST00000485355 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
AC116562.1-201ENST00000485355 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
AC116562.1-201ENST00000485355 POTEHQ6S545 545 aa15.25■□□□□ 0.03
AC116562.1-201ENST00000485355 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
AC116562.1-201ENST00000485355 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
AC116562.1-201ENST00000485355 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
AC116562.1-201ENST00000485355 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
AC116562.1-201ENST00000485355 PRR29P0C7W0 189 aa15.03■□□□□ -0
AC116562.1-201ENST00000485355 FKBP8Q14318 412 aa15.01□□□□□ -0.01
AC116562.1-201ENST00000485355 PROM2Q8N271 834 aa15.01□□□□□ -0.01
AC116562.1-201ENST00000485355 PRKAR2AP13861 404 aaKnown RBP14.93□□□□□ -0.02
AC116562.1-201ENST00000485355 CHADLQ6NUI6 762 aa14.82□□□□□ -0.04
AC116562.1-201ENST00000485355 CREBZFQ9NS37 354 aa14.73□□□□□ -0.05
AC116562.1-201ENST00000485355 HAX1O00165 279 aa14.72□□□□□ -0.05
AC116562.1-201ENST00000485355 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
AC116562.1-201ENST00000485355 FBXO3Q9UK99 471 aa14.63□□□□□ -0.07
AC116562.1-201ENST00000485355 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
AC116562.1-201ENST00000485355 PLEKHG5O94827 1062 aa14.58□□□□□ -0.08
AC116562.1-201ENST00000485355 MIER1Q8N108 512 aa14.58□□□□□ -0.08
AC116562.1-201ENST00000485355 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
AC116562.1-201ENST00000485355 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
AC116562.1-201ENST00000485355 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
AC116562.1-201ENST00000485355 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
AC116562.1-201ENST00000485355 EVX2Q03828 476 aa14.51□□□□□ -0.09
AC116562.1-201ENST00000485355 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
AC116562.1-201ENST00000485355 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
AC116562.1-201ENST00000485355 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
AC116562.1-201ENST00000485355 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
AC116562.1-201ENST00000485355 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
AC116562.1-201ENST00000485355 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
AC116562.1-201ENST00000485355 CLCN6P51797 869 aa14.28□□□□□ -0.12
AC116562.1-201ENST00000485355 GABBR2O75899 941 aa14.25□□□□□ -0.13
AC116562.1-201ENST00000485355 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
AC116562.1-201ENST00000485355 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
AC116562.1-201ENST00000485355 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
AC116562.1-201ENST00000485355 NUBP1P53384 320 aa14.21□□□□□ -0.13
AC116562.1-201ENST00000485355 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms