Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 KRT126P-201ENST00000549467 1181 ntBASIC14.01□□□□□ -0.17
HMG20AQ9NP66 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HMG20AQ9NP66 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14□□□□□ -0.17
HMG20AQ9NP66 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14□□□□□ -0.17
HMG20AQ9NP66 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14□□□□□ -0.17
HMG20AQ9NP66 AC116407.3-201ENST00000623905 1129 ntBASIC14□□□□□ -0.17
HMG20AQ9NP66 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14□□□□□ -0.17
HMG20AQ9NP66 AL645728.2-201ENST00000641974 660 ntBASIC14□□□□□ -0.17
HMG20AQ9NP66 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMG20AQ9NP66 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14□□□□□ -0.17
HMG20AQ9NP66 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms