Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 HCG4B-203ENST00000450128 991 ntBASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 AL161645.1-201ENST00000622716 1255 ntBASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 FAM215A-202ENST00000632077 792 ntBASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 REXO1L1P-201ENST00000379010 6598 ntBASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SND1-IT1Q9HBX3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 CSPG4P11-201ENST00000560634 4910 ntBASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 UNC93B6-202ENST00000528242 690 ntBASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 AL450472.2-201ENST00000603663 1156 ntBASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 AL121912.1-201ENST00000603683 238 ntBASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms