Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HIST3H2BA-201ENST00000436555 524 ntBASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HLA-J-203ENST00000494367 1087 ntBASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 GPALPP1-207ENST00000611650 899 ntBASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 AL607033.1-201ENST00000623900 1599 ntBASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CHRDL1Q9BU40 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC007191.1-201ENST00000623179 2995 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AL139400.1-201ENST00000366220 510 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC136604.1-201ENST00000418535 575 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 TSEN15P1-201ENST00000423257 515 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC069262.1-201ENST00000539058 672 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AL079307.3-201ENST00000556114 283 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AL589739.1-201ENST00000607720 493 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC079781.4-201ENST00000641908 219 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 KRT8P12-202ENST00000472924 1397 ntBASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHRDL1Q9BU40 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms