Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 CYP2T1P-202ENST00000641596 2535 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 KRT18P46-201ENST00000435568 1279 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCA3Q99758 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCA3Q99758 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.65■□□□□ 0.74
ABCA3Q99758 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ABCA3Q99758 TRMT112P3-201ENST00000580149 358 ntBASIC19.65■□□□□ 0.74
ABCA3Q99758 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ABCA3Q99758 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCA3Q99758 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ABCA3Q99758 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.64■□□□□ 0.74
ABCA3Q99758 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
ABCA3Q99758 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 CICP13-201ENST00000422015 2789 ntBASIC19.64■□□□□ 0.73
ABCA3Q99758 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.64■□□□□ 0.73
ABCA3Q99758 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ABCA3Q99758 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ABCA3Q99758 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ABCA3Q99758 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC19.64■□□□□ 0.73
ABCA3Q99758 AGPAT5P1-201ENST00000455855 1019 ntBASIC19.64■□□□□ 0.73
ABCA3Q99758 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.64■□□□□ 0.73
ABCA3Q99758 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.64■□□□□ 0.73
ABCA3Q99758 SIGLEC22P-201ENST00000599104 714 ntBASIC19.64■□□□□ 0.73
ABCA3Q99758 AL118522.1-201ENST00000611368 560 ntBASIC19.64■□□□□ 0.73
ABCA3Q99758 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.64■□□□□ 0.73
ABCA3Q99758 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC19.64■□□□□ 0.73
ABCA3Q99758 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
ABCA3Q99758 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.64■□□□□ 0.73
ABCA3Q99758 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA3Q99758 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ABCA3Q99758 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC19.63■□□□□ 0.73
ABCA3Q99758 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCA3Q99758 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.63■□□□□ 0.73
ABCA3Q99758 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCA3Q99758 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.63■□□□□ 0.73
ABCA3Q99758 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCA3Q99758 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.63■□□□□ 0.73
ABCA3Q99758 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCA3Q99758 RN7SL357P-201ENST00000581065 298 ntBASIC19.63■□□□□ 0.73
ABCA3Q99758 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCA3Q99758 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA3Q99758 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 AQP7P5-201ENST00000428759 1049 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 AQP7P4-201ENST00000447083 1042 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 AQP7P2-201ENST00000453967 1041 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 DUX4L50-201ENST00000455245 715 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.62■□□□□ 0.73
ABCA3Q99758 AC148477.9-201ENST00000623974 539 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 AQP7P3-201ENST00000624547 1041 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.62■□□□□ 0.73
ABCA3Q99758 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A21P-201ENST00000510875 1396 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A15P-201ENST00000514465 1395 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A6P-201ENST00000515148 1394 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A16P-201ENST00000526662 1395 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A9P-201ENST00000527940 1395 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A5P-201ENST00000528738 1395 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A14P-201ENST00000530386 1395 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 FAM90A13P-201ENST00000534703 1395 ntBASIC19.62■□□□□ 0.73
ABCA3Q99758 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCA3Q99758 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCA3Q99758 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCA3Q99758 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCA3Q99758 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms