Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NPAS2Q99743 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.07■□□□□ 0
NPAS2Q99743 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NPAS2Q99743 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NPAS2Q99743 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
NPAS2Q99743 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.06■□□□□ 0
NPAS2Q99743 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NPAS2Q99743 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 ACE3P-201ENST00000423435 1973 ntBASIC15.06■□□□□ 0
NPAS2Q99743 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NPAS2Q99743 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 AC236430.1-201ENST00000402231 743 ntBASIC15.06■□□□□ 0
NPAS2Q99743 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 AC241585.1-201ENST00000433527 519 ntBASIC15.06■□□□□ 0
NPAS2Q99743 TSPY16P-201ENST00000449843 468 ntBASIC15.06■□□□□ 0
NPAS2Q99743 PHKG1P2-201ENST00000457537 863 ntBASIC15.06■□□□□ 0
NPAS2Q99743 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.06■□□□□ 0
NPAS2Q99743 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.06■□□□□ 0
NPAS2Q99743 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 RN7SL204P-201ENST00000582831 262 ntBASIC15.06■□□□□ 0
NPAS2Q99743 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.06■□□□□ 0
NPAS2Q99743 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.06■□□□□ 0
NPAS2Q99743 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.06■□□□□ 0
NPAS2Q99743 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NPAS2Q99743 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.06■□□□□ 0
NPAS2Q99743 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NPAS2Q99743 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS2Q99743 CICP11-201ENST00000434745 2827 ntBASIC15.06■□□□□ 0
NPAS2Q99743 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.06■□□□□ 0
NPAS2Q99743 SBF1P1-201ENST00000444527 5631 ntBASIC15.06■□□□□ 0
NPAS2Q99743 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.05■□□□□ 0
NPAS2Q99743 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPAS2Q99743 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.05■□□□□ 0
NPAS2Q99743 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ 0
NPAS2Q99743 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.05■□□□□ 0
NPAS2Q99743 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
NPAS2Q99743 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.05■□□□□ 0
NPAS2Q99743 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.05■□□□□ 0
NPAS2Q99743 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.05■□□□□ 0
NPAS2Q99743 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPAS2Q99743 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
NPAS2Q99743 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS2Q99743 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPAS2Q99743 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.05■□□□□ -0
NPAS2Q99743 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS2Q99743 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS2Q99743 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.05■□□□□ -0
NPAS2Q99743 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS2Q99743 RPL37AP1-201ENST00000412502 279 ntBASIC15.05■□□□□ -0
NPAS2Q99743 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS2Q99743 MTND6P24-201ENST00000440466 518 ntBASIC15.05■□□□□ -0
NPAS2Q99743 AC002472.2-201ENST00000442739 958 ntBASIC15.05■□□□□ -0
NPAS2Q99743 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS2Q99743 HLA-V-204ENST00000476601 1289 ntBASIC15.05■□□□□ -0
NPAS2Q99743 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.05■□□□□ -0
NPAS2Q99743 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.05■□□□□ -0
NPAS2Q99743 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.05■□□□□ -0
NPAS2Q99743 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.05■□□□□ -0
NPAS2Q99743 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.05■□□□□ -0
NPAS2Q99743 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.05■□□□□ -0
NPAS2Q99743 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.05■□□□□ -0
NPAS2Q99743 AC138761.1-201ENST00000584393 385 ntBASIC15.05■□□□□ -0
NPAS2Q99743 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.05■□□□□ -0
NPAS2Q99743 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms