Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 FGD5P1-202ENST00000614866 2498 ntBASIC14.04□□□□□ -0.16
SNX18Q96RF0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.04□□□□□ -0.16
SNX18Q96RF0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 Z92544.3-201ENST00000624747 417 ntBASIC14.04□□□□□ -0.16
SNX18Q96RF0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 KRT8P12-202ENST00000472924 1397 ntBASIC14.04□□□□□ -0.16
SNX18Q96RF0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.04□□□□□ -0.16
SNX18Q96RF0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNX18Q96RF0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNX18Q96RF0 FAM58DP-201ENST00000428076 619 ntBASIC14.03□□□□□ -0.16
SNX18Q96RF0 GPS2P2-201ENST00000430745 888 ntBASIC14.03□□□□□ -0.16
SNX18Q96RF0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.03□□□□□ -0.16
SNX18Q96RF0 AL133215.2-201ENST00000609242 977 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms