Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
C9orf85Q96MD7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AP006288.1-201ENST00000446065 395 ntBASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AC073592.8-201ENST00000624126 511 ntBASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AC004461.2-201ENST00000629517 803 ntBASIC11.11□□□□□ -0.63
C9orf85Q96MD7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
C9orf85Q96MD7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 INTS4P1-203ENST00000641008 3683 ntBASIC11.1□□□□□ -0.63
C9orf85Q96MD7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
C9orf85Q96MD7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms