Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 AL645728.2-202ENST00000641679 227 ntBASIC17.33■□□□□ 0.36
DHX58Q96C10 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
DHX58Q96C10 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.33■□□□□ 0.36
DHX58Q96C10 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.33■□□□□ 0.36
DHX58Q96C10 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.32■□□□□ 0.36
DHX58Q96C10 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 CLK3P2-201ENST00000427566 1453 ntBASIC17.32■□□□□ 0.36
DHX58Q96C10 BTBD7P1-201ENST00000447253 1453 ntBASIC17.32■□□□□ 0.36
DHX58Q96C10 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DHX58Q96C10 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.32■□□□□ 0.36
DHX58Q96C10 CICP4-201ENST00000447359 2812 ntBASIC17.32■□□□□ 0.36
DHX58Q96C10 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DHX58Q96C10 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 AL390755.1-201ENST00000623716 2027 ntBASIC17.32■□□□□ 0.36
DHX58Q96C10 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.32■□□□□ 0.36
DHX58Q96C10 AC104457.1-201ENST00000401024 814 ntBASIC17.32■□□□□ 0.36
DHX58Q96C10 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.32■□□□□ 0.36
DHX58Q96C10 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.32■□□□□ 0.36
DHX58Q96C10 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.32■□□□□ 0.36
DHX58Q96C10 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DHX58Q96C10 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.32■□□□□ 0.36
DHX58Q96C10 AC022144.1-201ENST00000602255 1580 ntBASIC17.32■□□□□ 0.36
DHX58Q96C10 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DHX58Q96C10 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 AC007191.1-201ENST00000623179 2995 ntBASIC17.31■□□□□ 0.36
DHX58Q96C10 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.31■□□□□ 0.36
DHX58Q96C10 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.31■□□□□ 0.36
DHX58Q96C10 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.31■□□□□ 0.36
DHX58Q96C10 SRD5A3P1-201ENST00000603021 949 ntBASIC17.31■□□□□ 0.36
DHX58Q96C10 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.31■□□□□ 0.36
DHX58Q96C10 AC006538.3-201ENST00000612495 578 ntBASIC17.31■□□□□ 0.36
DHX58Q96C10 AC004790.1-201ENST00000612686 536 ntBASIC17.31■□□□□ 0.36
DHX58Q96C10 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
DHX58Q96C10 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DHX58Q96C10 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DHX58Q96C10 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DHX58Q96C10 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms