Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKAP2Q8WWK9 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 KRT8P24-201ENST00000560290 1559 ntBASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 AC022447.6-201ENST00000515522 438 ntBASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 AP002472.1-201ENST00000577490 586 ntBASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 AC068137.2-201ENST00000605408 478 ntBASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 LILRP1-201ENST00000444199 1370 ntBASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKAP2Q8WWK9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 AC015818.8-201ENST00000587907 1519 ntBASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 HLA-H-201ENST00000383620 1096 ntBASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 AC015910.1-201ENST00000579400 975 ntBASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CKAP2Q8WWK9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 AKAP8P1-201ENST00000434743 1349 ntBASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms