Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 MIR326-201ENST00000362220 95 ntBASIC18■□□□□ 0.47
NKX2-3Q8TAU0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 AC104306.2-201ENST00000451877 341 ntBASIC18■□□□□ 0.47
NKX2-3Q8TAU0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 AP005019.2-201ENST00000615104 511 ntBASIC18■□□□□ 0.47
NKX2-3Q8TAU0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 AC138028.6-201ENST00000616106 1482 ntBASIC18■□□□□ 0.47
NKX2-3Q8TAU0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 UPF3AP2-201ENST00000457924 1132 ntBASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX2-3Q8TAU0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 HINT2P1-201ENST00000419438 481 ntBASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AC253536.4-201ENST00000440539 267 ntBASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AC026434.2-201ENST00000506094 1078 ntBASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 SCARNA20.5-201ENST00000516991 142 ntBASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 KRT90P-201ENST00000549264 1064 ntBASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 AJ011931.1-201ENST00000618749 2492 ntBASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX2-3Q8TAU0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms