Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 BOLA2P3-201ENST00000404566 256 ntBASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 AC025279.2-201ENST00000569730 653 ntBASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 GNRHR2-203ENST00000581100 1187 ntBASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 AC091951.1-201ENST00000512854 2465 ntBASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 AL137783.1-201ENST00000623494 1896 ntBASIC15.08■□□□□ 0.01
TRAM1L1Q8N609 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 AC079776.1-201ENST00000401540 1152 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 AC112492.5-201ENST00000421897 457 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 C2orf27AP3-201ENST00000434123 579 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 AC016694.1-201ENST00000434179 700 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 AC234783.1-201ENST00000441761 496 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 GPR53P-205ENST00000457298 1084 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 FTH1P14-201ENST00000482930 551 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 RAB43P1-201ENST00000561790 589 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 AL354718.3-201ENST00000616414 581 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 CR382287.1-201ENST00000623954 586 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 FLJ16779-201ENST00000612722 7638 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 AC055811.4-201ENST00000624039 1754 ntBASIC15.08■□□□□ 0
TRAM1L1Q8N609 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAM1L1Q8N609 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.08■□□□□ 0
TRAM1L1Q8N609 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.07■□□□□ 0
TRAM1L1Q8N609 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.07■□□□□ 0
TRAM1L1Q8N609 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAM1L1Q8N609 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms