Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 INGX-202ENST00000489074 768 ntBASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 TPRX2P-201ENST00000535362 881 ntBASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC104794.3-201ENST00000566840 1248 ntBASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 RRP7BP-205ENST00000566851 833 ntBASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC036164.1-201ENST00000570544 333 ntBASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TTC9CQ8N5M4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.15□□□□□ -0.47
TTC9CQ8N5M4 CLK3P2-201ENST00000427566 1453 ntBASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TTC9CQ8N5M4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms