Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 CICP24-201ENST00000605464 2705 ntBASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 AC025279.2-201ENST00000569730 653 ntBASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 MIR6869-201ENST00000619434 62 ntBASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 RHOXF1P1-202ENST00000635473 501 ntBASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 AL009178.2-201ENST00000597278 2719 ntBASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.85■□□□□ 0.13
PHTF2Q8N3S3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 AL138799.1-201ENST00000448213 1675 ntBASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 AP005019.2-201ENST00000615104 511 ntBASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.84■□□□□ 0.13
PHTF2Q8N3S3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 FAM45BP-202ENST00000592932 1624 ntBASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHTF2Q8N3S3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHTF2Q8N3S3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHTF2Q8N3S3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms