Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FO681548.1-201ENST00000455617 1132 ntBASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AL590640.2-201ENST00000457038 527 ntBASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AC078819.1-201ENST00000547454 765 ntBASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AC012085.1-201ENST00000548270 765 ntBASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AC138951.2-201ENST00000623455 1161 ntBASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 FAM21FP-201ENST00000426241 1131 ntBASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 AC079316.1-201ENST00000548397 411 ntBASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 AL033527.4-201ENST00000641026 673 ntBASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.12■□□□□ 0.17
SCN4BQ8IWT1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 KRT8P14-201ENST00000414254 1442 ntBASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 REXO1L5P-201ENST00000622260 2098 ntBASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 REXO1L6P-201ENST00000603433 1515 ntBASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 CNN2P8-201ENST00000421872 913 ntBASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.11■□□□□ 0.17
SCN4BQ8IWT1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms