Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AC126365.1-201ENST00000578585 1514 ntBASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 MTX1P1-201ENST00000440904 838 ntBASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 RN7SL713P-201ENST00000582127 302 ntBASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 PPY2P-201ENST00000582808 702 ntBASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 REXO1L2P-201ENST00000425429 2069 ntBASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE3BQ7Z3V4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 BTBD6P1-201ENST00000412176 1267 ntBASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 ZNF767P-206ENST00000513792 565 ntBASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 AC005695.3-201ENST00000614522 232 ntBASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 KRT8P4-201ENST00000509735 1454 ntBASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 AC015818.8-201ENST00000587907 1519 ntBASIC18.95■□□□□ 0.62
UBE3BQ7Z3V4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms