Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AL121723.1-201ENST00000445194 1519 ntBASIC16.11■□□□□ 0.17
RNF43Q68DV7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 LINC00552-201ENST00000625151 2579 ntBASIC16.1■□□□□ 0.17
RNF43Q68DV7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 AP003680.1-201ENST00000598970 3660 ntBASIC16.1■□□□□ 0.17
RNF43Q68DV7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 AL133267.1-201ENST00000398220 340 ntBASIC16.1■□□□□ 0.17
RNF43Q68DV7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 ACTBP11-201ENST00000436287 1126 ntBASIC16.1■□□□□ 0.17
RNF43Q68DV7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.1■□□□□ 0.17
RNF43Q68DV7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF43Q68DV7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RNF43Q68DV7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 AC104596.2-201ENST00000512793 793 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms