Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 GMFG-209ENST00000600322 622 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 TMBIM7P-203ENST00000641617 1718 ntBASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPAQ5VT25 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 KHSRPP1-201ENST00000427983 1768 ntBASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 ST13P19-201ENST00000442505 1124 ntBASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 HLA-C-210ENST00000640219 976 ntBASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 HLA-DQB2-231ENST00000435145 2026 ntBASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AL627422.1-201ENST00000434104 580 ntBASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 AL031713.1-201ENST00000564813 661 ntBASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CDC42BPAQ5VT25 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 RPSAP15-201ENST00000448168 861 ntBASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 IGHVIII-5-2-201ENST00000522505 261 ntBASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 PCDHGB8P-201ENST00000502926 1973 ntBASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 AHCYP4-201ENST00000419201 1315 ntBASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
CDC42BPAQ5VT25 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 CHCHD2P9-201ENST00000461726 456 ntBASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 AC027237.1-201ENST00000560942 655 ntBASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms