Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC173Q0VFZ6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 ZNF259P1-201ENST00000407656 1365 ntBASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 NKAPP1-205ENST00000585790 367 ntBASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC173Q0VFZ6 KRT8P24-201ENST00000560290 1559 ntBASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 GHSR-202ENST00000427970 912 ntBASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 HMGN1P19-201ENST00000436976 333 ntBASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 AL049840.3-201ENST00000602669 611 ntBASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 AC008608.2-201ENST00000606089 416 ntBASIC17.4■□□□□ 0.38
CCDC173Q0VFZ6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms