Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AL360270.3-201ENST00000609118 1348 ntBASIC14.44□□□□□ -0.1
TNFRSF17Q02223 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 ENPP7P5-201ENST00000541031 1031 ntBASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AC027307.3-201ENST00000594262 1100 ntBASIC14.44□□□□□ -0.1
TNFRSF17Q02223 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 CU634019.7-201ENST00000624153 1185 ntBASIC14.44□□□□□ -0.1
TNFRSF17Q02223 FP236241.2-201ENST00000624906 1185 ntBASIC14.44□□□□□ -0.1
TNFRSF17Q02223 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 LINC00528-201ENST00000600723 2160 ntBASIC14.44□□□□□ -0.1
TNFRSF17Q02223 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF17Q02223 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 AC005252.2-201ENST00000624630 1141 ntBASIC14.43□□□□□ -0.1
TNFRSF17Q02223 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 ACE3P-201ENST00000423435 1973 ntBASIC14.43□□□□□ -0.1
TNFRSF17Q02223 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFRSF17Q02223 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms