Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
BRCA2P51587 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
BRCA2P51587 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.65■□□□□ 0.26
BRCA2P51587 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.65■□□□□ 0.26
BRCA2P51587 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
BRCA2P51587 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.65■□□□□ 0.26
BRCA2P51587 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
BRCA2P51587 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
BRCA2P51587 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.65■□□□□ 0.26
BRCA2P51587 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
BRCA2P51587 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.64■□□□□ 0.26
BRCA2P51587 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
BRCA2P51587 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRCA2P51587 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.64■□□□□ 0.25
BRCA2P51587 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 AC007952.4-201ENST00000573866 637 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.64■□□□□ 0.25
BRCA2P51587 AC009145.4-201ENST00000625119 1294 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 LINC02447-202ENST00000501888 2146 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRCA2P51587 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 LINC01815-202ENST00000641468 1409 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 FTH1P22-201ENST00000456305 520 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 AC026470.1-201ENST00000478038 846 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.64■□□□□ 0.25
BRCA2P51587 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.64■□□□□ 0.25
BRCA2P51587 AC006058.4-201ENST00000624016 1670 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRCA2P51587 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
BRCA2P51587 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
BRCA2P51587 AC244197.1-201ENST00000456494 951 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.64■□□□□ 0.25
BRCA2P51587 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
BRCA2P51587 AC055811.3-201ENST00000584952 686 ntBASIC16.64■□□□□ 0.25
BRCA2P51587 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCA2P51587 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BRCA2P51587 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.64■□□□□ 0.25
BRCA2P51587 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BRCA2P51587 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 AC093826.1-201ENST00000508655 993 ntBASIC16.63■□□□□ 0.25
BRCA2P51587 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.63■□□□□ 0.25
BRCA2P51587 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.63■□□□□ 0.25
BRCA2P51587 AC011471.3-201ENST00000623576 402 ntBASIC16.63■□□□□ 0.25
BRCA2P51587 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BRCA2P51587 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
BRCA2P51587 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BRCA2P51587 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCA2P51587 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCA2P51587 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCA2P51587 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCA2P51587 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.63■□□□□ 0.25
BRCA2P51587 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCA2P51587 AL513523.2-202ENST00000427283 2040 ntBASIC16.63■□□□□ 0.25
BRCA2P51587 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms