Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HADHAP40939 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HADHAP40939 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.54■□□□□ 0.08
HADHAP40939 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HADHAP40939 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.54■□□□□ 0.08
HADHAP40939 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HADHAP40939 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HADHAP40939 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 LINC00528-201ENST00000600723 2160 ntBASIC15.54■□□□□ 0.08
HADHAP40939 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.54■□□□□ 0.08
HADHAP40939 TPRX2P-201ENST00000535362 881 ntBASIC15.54■□□□□ 0.08
HADHAP40939 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
HADHAP40939 RARRES2P5-201ENST00000564013 466 ntBASIC15.54■□□□□ 0.08
HADHAP40939 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 AC036164.1-201ENST00000570544 333 ntBASIC15.54■□□□□ 0.08
HADHAP40939 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.54■□□□□ 0.08
HADHAP40939 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
HADHAP40939 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HADHAP40939 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.54■□□□□ 0.08
HADHAP40939 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HADHAP40939 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HADHAP40939 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HADHAP40939 AC232323.1-201ENST00000540724 2099 ntBASIC15.53■□□□□ 0.08
HADHAP40939 REXO1L5P-201ENST00000622260 2098 ntBASIC15.53■□□□□ 0.08
HADHAP40939 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HADHAP40939 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HADHAP40939 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.53■□□□□ 0.08
HADHAP40939 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HADHAP40939 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 RRP7BP-205ENST00000566851 833 ntBASIC15.53■□□□□ 0.08
HADHAP40939 MIR4745-201ENST00000577608 62 ntBASIC15.53■□□□□ 0.08
HADHAP40939 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.53■□□□□ 0.08
HADHAP40939 AC025181.2-201ENST00000606994 802 ntBASIC15.53■□□□□ 0.08
HADHAP40939 AL391069.4-201ENST00000609583 481 ntBASIC15.53■□□□□ 0.08
HADHAP40939 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.53■□□□□ 0.08
HADHAP40939 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.53■□□□□ 0.08
HADHAP40939 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.53■□□□□ 0.08
HADHAP40939 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 AJ011931.1-201ENST00000618749 2492 ntBASIC15.53■□□□□ 0.08
HADHAP40939 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.53■□□□□ 0.08
HADHAP40939 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HADHAP40939 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms