Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.42□□□□□ -0.26
GDNFP39905 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
GDNFP39905 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.41□□□□□ -0.26
GDNFP39905 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 ELL2P1-201ENST00000413990 1906 ntBASIC13.41□□□□□ -0.26
GDNFP39905 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.41□□□□□ -0.26
GDNFP39905 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.41□□□□□ -0.26
GDNFP39905 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 RPSAP43-201ENST00000402237 625 ntBASIC13.41□□□□□ -0.26
GDNFP39905 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.41□□□□□ -0.26
GDNFP39905 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.41□□□□□ -0.26
GDNFP39905 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.41□□□□□ -0.26
GDNFP39905 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.41□□□□□ -0.26
GDNFP39905 AC005829.1-201ENST00000570002 483 ntBASIC13.41□□□□□ -0.26
GDNFP39905 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 MIR4469-201ENST00000583919 79 ntBASIC13.41□□□□□ -0.26
GDNFP39905 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 AC073389.1-201ENST00000595595 795 ntBASIC13.41□□□□□ -0.26
GDNFP39905 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.41□□□□□ -0.26
GDNFP39905 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 CICP20-201ENST00000443330 2801 ntBASIC13.41□□□□□ -0.26
GDNFP39905 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 AP001267.2-201ENST00000532619 2086 ntBASIC13.41□□□□□ -0.26
GDNFP39905 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDNFP39905 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.41□□□□□ -0.26
GDNFP39905 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.41□□□□□ -0.26
GDNFP39905 AC152010.1-201ENST00000415779 2006 ntBASIC13.4□□□□□ -0.26
GDNFP39905 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.4□□□□□ -0.26
GDNFP39905 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.4□□□□□ -0.26
GDNFP39905 AL691432.1-201ENST00000596308 1422 ntBASIC13.4□□□□□ -0.26
GDNFP39905 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.4□□□□□ -0.26
GDNFP39905 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GDNFP39905 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.4□□□□□ -0.26
GDNFP39905 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.4□□□□□ -0.26
GDNFP39905 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDNFP39905 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.4□□□□□ -0.26
GDNFP39905 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms