Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
THBS4P35443 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.52□□□□□ -0.24
THBS4P35443 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
THBS4P35443 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.52□□□□□ -0.24
THBS4P35443 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 AC023908.3-201ENST00000564211 3047 ntBASIC13.52□□□□□ -0.24
THBS4P35443 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS4P35443 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 AC098850.1-201ENST00000419919 790 ntBASIC13.52□□□□□ -0.25
THBS4P35443 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.52□□□□□ -0.25
THBS4P35443 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.52□□□□□ -0.25
THBS4P35443 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 RN7SL399P-201ENST00000471648 279 ntBASIC13.52□□□□□ -0.25
THBS4P35443 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.52□□□□□ -0.25
THBS4P35443 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS4P35443 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS4P35443 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.52□□□□□ -0.25
THBS4P35443 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.52□□□□□ -0.25
THBS4P35443 AC036164.1-201ENST00000570544 333 ntBASIC13.52□□□□□ -0.25
THBS4P35443 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS4P35443 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS4P35443 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS4P35443 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
THBS4P35443 CLK3P2-201ENST00000427566 1453 ntBASIC13.52□□□□□ -0.25
THBS4P35443 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 AC138969.3-201ENST00000546612 1459 ntBASIC13.52□□□□□ -0.25
THBS4P35443 AC138932.2-201ENST00000548268 1459 ntBASIC13.52□□□□□ -0.25
THBS4P35443 AC126755.4-201ENST00000549796 1459 ntBASIC13.52□□□□□ -0.25
THBS4P35443 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS4P35443 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
THBS4P35443 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
THBS4P35443 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS4P35443 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 AC013726.1-201ENST00000563747 2285 ntBASIC13.51□□□□□ -0.25
THBS4P35443 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.51□□□□□ -0.25
THBS4P35443 ZBED1P1-201ENST00000502364 1930 ntBASIC13.51□□□□□ -0.25
THBS4P35443 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.51□□□□□ -0.25
THBS4P35443 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS4P35443 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 WASH3P-207ENST00000560956 1394 ntBASIC13.51□□□□□ -0.25
THBS4P35443 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 AC098614.1-201ENST00000368528 745 ntBASIC13.51□□□□□ -0.25
THBS4P35443 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.51□□□□□ -0.25
THBS4P35443 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS4P35443 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.51□□□□□ -0.25
THBS4P35443 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
THBS4P35443 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
THBS4P35443 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS4P35443 AP006294.1-201ENST00000415407 339 ntBASIC13.51□□□□□ -0.25
THBS4P35443 NME2P1-201ENST00000426182 414 ntBASIC13.51□□□□□ -0.25
THBS4P35443 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms