Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 MIR600HG-201ENST00000449175 5984 ntBASIC16.19■□□□□ 0.18
CHRNA3P32297 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA3P32297 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA3P32297 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CHRNA3P32297 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
CHRNA3P32297 GHSR-202ENST00000427970 912 ntBASIC16.19■□□□□ 0.18
CHRNA3P32297 HIST3H2BA-201ENST00000436555 524 ntBASIC16.19■□□□□ 0.18
CHRNA3P32297 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA3P32297 AC114501.2-201ENST00000439631 535 ntBASIC16.19■□□□□ 0.18
CHRNA3P32297 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNA3P32297 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNA3P32297 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA3P32297 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA3P32297 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA3P32297 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA3P32297 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 AC015922.1-201ENST00000421102 1152 ntBASIC16.18■□□□□ 0.18
CHRNA3P32297 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.18■□□□□ 0.18
CHRNA3P32297 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA3P32297 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 AL109936.8-201ENST00000641772 604 ntBASIC16.18■□□□□ 0.18
CHRNA3P32297 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA3P32297 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA3P32297 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA3P32297 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA3P32297 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA3P32297 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA3P32297 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA3P32297 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA3P32297 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA3P32297 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA3P32297 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms