Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.1□□□□□ -0.15
SHC1P29353 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.1□□□□□ -0.15
SHC1P29353 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.1□□□□□ -0.15
SHC1P29353 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.1□□□□□ -0.15
SHC1P29353 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.1□□□□□ -0.15
SHC1P29353 AC190387.1-201ENST00000551683 408 ntBASIC14.1□□□□□ -0.15
SHC1P29353 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.1□□□□□ -0.15
SHC1P29353 CHCHD2P3-201ENST00000603038 451 ntBASIC14.1□□□□□ -0.15
SHC1P29353 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.1□□□□□ -0.15
SHC1P29353 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SHC1P29353 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SHC1P29353 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SHC1P29353 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.09□□□□□ -0.15
SHC1P29353 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 CICP4-201ENST00000447359 2812 ntBASIC14.09□□□□□ -0.15
SHC1P29353 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.09□□□□□ -0.15
SHC1P29353 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SHC1P29353 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.09□□□□□ -0.15
SHC1P29353 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.09□□□□□ -0.15
SHC1P29353 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 API5-211ENST00000534695 560 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.09□□□□□ -0.15
SHC1P29353 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.09□□□□□ -0.15
SHC1P29353 MIR3197-201ENST00000582241 73 ntBASIC14.09□□□□□ -0.15
SHC1P29353 MIR8072-201ENST00000614241 80 ntBASIC14.09□□□□□ -0.15
SHC1P29353 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SHC1P29353 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.09□□□□□ -0.15
SHC1P29353 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHC1P29353 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.09□□□□□ -0.15
SHC1P29353 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.09□□□□□ -0.15
SHC1P29353 SLC7A15P-201ENST00000424028 1363 ntBASIC14.09□□□□□ -0.15
SHC1P29353 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHC1P29353 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
SHC1P29353 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SHC1P29353 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.08□□□□□ -0.15
SHC1P29353 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHC1P29353 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.08□□□□□ -0.16
SHC1P29353 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SHC1P29353 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHC1P29353 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SHC1P29353 AC098850.1-201ENST00000419919 790 ntBASIC14.08□□□□□ -0.16
SHC1P29353 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms