Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NR4A1P22736 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NR4A1P22736 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NR4A1P22736 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NR4A1P22736 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NR4A1P22736 SPDYE11-202ENST00000450699 704 ntBASIC14.35□□□□□ -0.11
NR4A1P22736 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.35□□□□□ -0.11
NR4A1P22736 AP000344.2-201ENST00000512987 629 ntBASIC14.35□□□□□ -0.11
NR4A1P22736 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.35□□□□□ -0.11
NR4A1P22736 SPDYE9P-201ENST00000570642 692 ntBASIC14.35□□□□□ -0.11
NR4A1P22736 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.35□□□□□ -0.11
NR4A1P22736 SPDYE10P-202ENST00000612005 668 ntBASIC14.35□□□□□ -0.11
NR4A1P22736 SPDYE8P-202ENST00000612377 668 ntBASIC14.35□□□□□ -0.11
NR4A1P22736 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.35□□□□□ -0.11
NR4A1P22736 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NR4A1P22736 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A1P22736 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NR4A1P22736 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 AC089987.1-201ENST00000551654 2209 ntBASIC14.34□□□□□ -0.11
NR4A1P22736 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.34□□□□□ -0.11
NR4A1P22736 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.34□□□□□ -0.11
NR4A1P22736 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.34□□□□□ -0.11
NR4A1P22736 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 CNN2P11-201ENST00000429351 262 ntBASIC14.34□□□□□ -0.11
NR4A1P22736 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 TIMM8BP1-201ENST00000452384 211 ntBASIC14.34□□□□□ -0.11
NR4A1P22736 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.34□□□□□ -0.11
NR4A1P22736 AL135744.1-201ENST00000565098 629 ntBASIC14.34□□□□□ -0.11
NR4A1P22736 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR4A1P22736 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A1P22736 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.34□□□□□ -0.11
NR4A1P22736 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A1P22736 AL596442.2-201ENST00000610240 980 ntBASIC14.34□□□□□ -0.11
NR4A1P22736 AL513210.1-201ENST00000629608 234 ntBASIC14.34□□□□□ -0.11
NR4A1P22736 BEND3P1-201ENST00000421591 1944 ntBASIC14.34□□□□□ -0.11
NR4A1P22736 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms