Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NCLP19338 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.36■□□□□ 0.53
NCLP19338 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.36■□□□□ 0.53
NCLP19338 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.36■□□□□ 0.53
NCLP19338 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NCLP19338 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.36■□□□□ 0.53
NCLP19338 AL671277.1-201ENST00000429656 993 ntBASIC18.36■□□□□ 0.53
NCLP19338 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.36■□□□□ 0.53
NCLP19338 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLP19338 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLP19338 FAM86C2P-203ENST00000528684 1004 ntBASIC18.36■□□□□ 0.53
NCLP19338 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCLP19338 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLP19338 AC061975.2-201ENST00000581722 295 ntBASIC18.36■□□□□ 0.53
NCLP19338 AC026120.1-201ENST00000611536 926 ntBASIC18.36■□□□□ 0.53
NCLP19338 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLP19338 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLP19338 PEG13-201ENST00000631594 5667 ntBASIC18.36■□□□□ 0.53
NCLP19338 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NCLP19338 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC18.35■□□□□ 0.53
NCLP19338 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.35■□□□□ 0.53
NCLP19338 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NCLP19338 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.35■□□□□ 0.53
NCLP19338 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC18.35■□□□□ 0.53
NCLP19338 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.35■□□□□ 0.53
NCLP19338 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 TSEN15P1-201ENST00000423257 515 ntBASIC18.35■□□□□ 0.53
NCLP19338 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 HMGN1P19-201ENST00000436976 333 ntBASIC18.35■□□□□ 0.53
NCLP19338 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.35■□□□□ 0.53
NCLP19338 RNA5SP410-201ENST00000516285 106 ntBASIC18.35■□□□□ 0.53
NCLP19338 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.35■□□□□ 0.53
NCLP19338 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.35■□□□□ 0.53
NCLP19338 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
NCLP19338 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NCLP19338 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NCLP19338 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCLP19338 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.35■□□□□ 0.53
NCLP19338 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.34■□□□□ 0.53
NCLP19338 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms