Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.82■□□□□ 0.28
ITGA4P13612 RPL7P3-201ENST00000441388 714 ntBASIC16.82■□□□□ 0.28
ITGA4P13612 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.82■□□□□ 0.28
ITGA4P13612 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.82■□□□□ 0.28
ITGA4P13612 AC025181.2-201ENST00000606994 802 ntBASIC16.82■□□□□ 0.28
ITGA4P13612 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.82■□□□□ 0.28
ITGA4P13612 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ITGA4P13612 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ITGA4P13612 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ITGA4P13612 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.82■□□□□ 0.28
ITGA4P13612 AC112693.3-201ENST00000624819 1983 ntBASIC16.82■□□□□ 0.28
ITGA4P13612 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA4P13612 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA4P13612 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA4P13612 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ITGA4P13612 AC106881.1-201ENST00000605849 3329 ntBASIC16.81■□□□□ 0.28
ITGA4P13612 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA4P13612 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
ITGA4P13612 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA4P13612 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ITGA4P13612 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
ITGA4P13612 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA4P13612 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.81■□□□□ 0.28
ITGA4P13612 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.81■□□□□ 0.28
ITGA4P13612 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA4P13612 MIR6799-201ENST00000620297 69 ntBASIC16.81■□□□□ 0.28
ITGA4P13612 BX539320.1-201ENST00000623759 877 ntBASIC16.81■□□□□ 0.28
ITGA4P13612 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA4P13612 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ITGA4P13612 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA4P13612 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA4P13612 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA4P13612 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA4P13612 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA4P13612 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ITGA4P13612 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ITGA4P13612 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ITGA4P13612 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ITGA4P13612 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 KRT18P25-201ENST00000508931 1278 ntBASIC16.8■□□□□ 0.28
ITGA4P13612 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.8■□□□□ 0.28
ITGA4P13612 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 AP005019.2-201ENST00000615104 511 ntBASIC16.8■□□□□ 0.28
ITGA4P13612 AL033527.4-201ENST00000641026 673 ntBASIC16.8■□□□□ 0.28
ITGA4P13612 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 TCAF2P1-201ENST00000291129 2421 ntBASIC16.8■□□□□ 0.28
ITGA4P13612 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ITGA4P13612 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA4P13612 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.8■□□□□ 0.28
ITGA4P13612 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA4P13612 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms