Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 Z97205.2-201ENST00000564697 1639 ntBASIC13.5□□□□□ -0.25
UBCP0CG48 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
UBCP0CG48 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 CETN4P-206ENST00000642099 2168 ntBASIC13.5□□□□□ -0.25
UBCP0CG48 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 AL022342.1-201ENST00000400363 863 ntBASIC13.5□□□□□ -0.25
UBCP0CG48 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
UBCP0CG48 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.5□□□□□ -0.25
UBCP0CG48 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.5□□□□□ -0.25
UBCP0CG48 AP000845.1-201ENST00000581677 2131 ntBASIC13.5□□□□□ -0.25
UBCP0CG48 MIR4469-201ENST00000583919 79 ntBASIC13.5□□□□□ -0.25
UBCP0CG48 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
UBCP0CG48 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBCP0CG48 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
UBCP0CG48 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.5□□□□□ -0.25
UBCP0CG48 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBCP0CG48 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.49□□□□□ -0.25
UBCP0CG48 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.49□□□□□ -0.25
UBCP0CG48 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBCP0CG48 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.49□□□□□ -0.25
UBCP0CG48 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.49□□□□□ -0.25
UBCP0CG48 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.49□□□□□ -0.25
UBCP0CG48 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBCP0CG48 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBCP0CG48 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.49□□□□□ -0.25
UBCP0CG48 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms