Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CSF1P09603 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CSF1P09603 AC092135.3-201ENST00000624151 1846 ntBASIC13.34□□□□□ -0.27
CSF1P09603 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.34□□□□□ -0.27
CSF1P09603 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSF1P09603 AC015656.1-201ENST00000624209 3578 ntBASIC13.33□□□□□ -0.27
CSF1P09603 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CSF1P09603 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
CSF1P09603 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CSF1P09603 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CSF1P09603 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.33□□□□□ -0.27
CSF1P09603 PTENP1-202ENST00000532280 3996 ntBASIC13.33□□□□□ -0.27
CSF1P09603 REXO1L2P-201ENST00000425429 2069 ntBASIC13.33□□□□□ -0.27
CSF1P09603 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 AC113367.3-201ENST00000508316 1912 ntBASIC13.33□□□□□ -0.28
CSF1P09603 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CSF1P09603 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CSF1P09603 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.33□□□□□ -0.28
CSF1P09603 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 AC004987.2-201ENST00000395959 1148 ntBASIC13.33□□□□□ -0.28
CSF1P09603 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 FAM86GP-201ENST00000448322 971 ntBASIC13.33□□□□□ -0.28
CSF1P09603 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.33□□□□□ -0.28
CSF1P09603 AL513480.1-201ENST00000451731 511 ntBASIC13.33□□□□□ -0.28
CSF1P09603 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.33□□□□□ -0.28
CSF1P09603 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.33□□□□□ -0.28
CSF1P09603 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.33□□□□□ -0.28
CSF1P09603 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.33□□□□□ -0.28
CSF1P09603 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CSF1P09603 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CSF1P09603 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSF1P09603 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.32□□□□□ -0.28
CSF1P09603 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.32□□□□□ -0.28
CSF1P09603 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.32□□□□□ -0.28
CSF1P09603 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSF1P09603 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.32□□□□□ -0.28
CSF1P09603 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSF1P09603 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.32□□□□□ -0.28
CSF1P09603 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSF1P09603 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms