Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MMP2P08253 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.36■□□□□ 0.05
MMP2P08253 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP2P08253 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MMP2P08253 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP2P08253 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP2P08253 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 BAATP1-201ENST00000412284 1225 ntBASIC15.35■□□□□ 0.05
MMP2P08253 TMEM14DP-201ENST00000422205 345 ntBASIC15.35■□□□□ 0.05
MMP2P08253 NME2P1-201ENST00000426182 414 ntBASIC15.35■□□□□ 0.05
MMP2P08253 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP2P08253 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP2P08253 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP2P08253 AC026434.2-201ENST00000506094 1078 ntBASIC15.35■□□□□ 0.05
MMP2P08253 AC022616.1-201ENST00000518688 554 ntBASIC15.35■□□□□ 0.05
MMP2P08253 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP2P08253 TDH-203ENST00000531764 1110 ntBASIC15.35■□□□□ 0.05
MMP2P08253 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP2P08253 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP2P08253 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 KRT8P35-201ENST00000483942 1338 ntBASIC15.35■□□□□ 0.05
MMP2P08253 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MMP2P08253 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MMP2P08253 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP2P08253 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
MMP2P08253 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 CU639417.3-201ENST00000624240 1404 ntBASIC15.34■□□□□ 0.05
MMP2P08253 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MMP2P08253 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MMP2P08253 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP2P08253 AL512384.1-201ENST00000406683 331 ntBASIC15.34■□□□□ 0.05
MMP2P08253 GIMAP3P-201ENST00000495150 836 ntBASIC15.34■□□□□ 0.05
MMP2P08253 AC011495.1-201ENST00000498085 584 ntBASIC15.34■□□□□ 0.05
MMP2P08253 USP32P1-208ENST00000506594 1164 ntBASIC15.34■□□□□ 0.05
MMP2P08253 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.34■□□□□ 0.05
MMP2P08253 AC068587.3-201ENST00000526613 355 ntBASIC15.34■□□□□ 0.05
MMP2P08253 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.34■□□□□ 0.05
MMP2P08253 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.34■□□□□ 0.05
MMP2P08253 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
MMP2P08253 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
MMP2P08253 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP2P08253 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP2P08253 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
MMP2P08253 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms