Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CTSDP07339 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CTSDP07339 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CTSDP07339 AC104457.1-201ENST00000401024 814 ntBASIC12.77□□□□□ -0.37
CTSDP07339 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.77□□□□□ -0.37
CTSDP07339 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.77□□□□□ -0.37
CTSDP07339 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 RN7SL589P-201ENST00000481268 310 ntBASIC12.77□□□□□ -0.37
CTSDP07339 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.77□□□□□ -0.37
CTSDP07339 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.77□□□□□ -0.37
CTSDP07339 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.77□□□□□ -0.37
CTSDP07339 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.77□□□□□ -0.37
CTSDP07339 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 AC015910.1-201ENST00000579400 975 ntBASIC12.77□□□□□ -0.37
CTSDP07339 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.77□□□□□ -0.37
CTSDP07339 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.77□□□□□ -0.37
CTSDP07339 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 BX640515.1-201ENST00000617215 977 ntBASIC12.77□□□□□ -0.37
CTSDP07339 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CTSDP07339 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 AC005252.3-201ENST00000623855 2258 ntBASIC12.77□□□□□ -0.37
CTSDP07339 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.77□□□□□ -0.37
CTSDP07339 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.77□□□□□ -0.37
CTSDP07339 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 KRT18P2-201ENST00000447938 1258 ntBASIC12.76□□□□□ -0.37
CTSDP07339 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.76□□□□□ -0.37
CTSDP07339 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.76□□□□□ -0.37
CTSDP07339 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CTSDP07339 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.76□□□□□ -0.37
CTSDP07339 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CTSDP07339 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CTSDP07339 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CTSDP07339 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.76□□□□□ -0.37
CTSDP07339 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CTSDP07339 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CTSDP07339 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CTSDP07339 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms