Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
APOBP04114 AC004554.1-201ENST00000422830 1468 ntBASIC9.22□□□□□ -0.93
APOBP04114 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 AP003680.1-201ENST00000598970 3660 ntBASIC9.22□□□□□ -0.93
APOBP04114 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 CICP12-201ENST00000455801 843 ntBASIC9.22□□□□□ -0.93
APOBP04114 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 DUT-207ENST00000559416 635 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 MIR3180-2-201ENST00000581748 88 ntBASIC9.22□□□□□ -0.93
APOBP04114 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 AC008972.2-201ENST00000606587 494 ntBASIC9.22□□□□□ -0.93
APOBP04114 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 RHEB-207ENST00000496004 744 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC9.22□□□□□ -0.93
APOBP04114 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC9.22□□□□□ -0.93
APOBP04114 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC9.22□□□□□ -0.93
APOBP04114 AC018846.1-201ENST00000568231 183 ntBASIC9.22□□□□□ -0.93
APOBP04114 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC9.22□□□□□ -0.93
APOBP04114 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
APOBP04114 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC9.21□□□□□ -0.93
APOBP04114 KRT18P46-201ENST00000435568 1279 ntBASIC9.21□□□□□ -0.93
APOBP04114 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 ABHD17AP9-201ENST00000561925 548 ntBASIC9.21□□□□□ -0.93
APOBP04114 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 AC087392.5-201ENST00000612517 489 ntBASIC9.21□□□□□ -0.93
APOBP04114 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 SURF4-203ENST00000371991 715 ntTSL 3 BASIC9.21□□□□□ -0.93
APOBP04114 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 AC023141.7-201ENST00000430646 407 ntBASIC9.21□□□□□ -0.93
APOBP04114 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC9.21□□□□□ -0.93
APOBP04114 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC9.21□□□□□ -0.93
APOBP04114 CHCHD2P2-201ENST00000503744 321 ntBASIC9.21□□□□□ -0.93
APOBP04114 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC9.21□□□□□ -0.93
APOBP04114 AC013553.1-201ENST00000560906 267 ntBASIC9.21□□□□□ -0.93
APOBP04114 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
APOBP04114 AC055811.3-201ENST00000584952 686 ntBASIC9.21□□□□□ -0.93
APOBP04114 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
APOBP04114 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
APOBP04114 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
APOBP04114 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms