Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.1□□□□□ -0.47
TRGV3P03979 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.1□□□□□ -0.47
TRGV3P03979 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.1□□□□□ -0.47
TRGV3P03979 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.1□□□□□ -0.47
TRGV3P03979 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.1□□□□□ -0.47
TRGV3P03979 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 AC008494.3-201ENST00000606615 944 ntBASIC12.1□□□□□ -0.47
TRGV3P03979 AL391069.4-201ENST00000609583 481 ntBASIC12.1□□□□□ -0.47
TRGV3P03979 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
TRGV3P03979 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 AC022532.1-201ENST00000624563 1728 ntBASIC12.1□□□□□ -0.47
TRGV3P03979 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 LINC02228-204ENST00000642115 2962 ntBASIC12.1□□□□□ -0.47
TRGV3P03979 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
TRGV3P03979 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRGV3P03979 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV3P03979 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 AC148477.4-201ENST00000613430 1793 ntBASIC12.1□□□□□ -0.47
TRGV3P03979 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV3P03979 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 TNRC18P2-201ENST00000417666 2714 ntBASIC12.1□□□□□ -0.47
TRGV3P03979 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRGV3P03979 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 AC134915.1-201ENST00000426461 574 ntBASIC12.09□□□□□ -0.47
TRGV3P03979 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.09□□□□□ -0.47
TRGV3P03979 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 VDAC1P7-201ENST00000462417 847 ntBASIC12.09□□□□□ -0.47
TRGV3P03979 API5-211ENST00000534695 560 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV3P03979 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.09□□□□□ -0.47
TRGV3P03979 CHCHD2P3-201ENST00000603038 451 ntBASIC12.09□□□□□ -0.47
TRGV3P03979 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
TRGV3P03979 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
TRGV3P03979 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV3P03979 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
TRGV3P03979 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms