Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APOA1P02647 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 AC005332.1-201ENST00000577698 1310 ntBASIC13.74□□□□□ -0.21
APOA1P02647 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.74□□□□□ -0.21
APOA1P02647 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.74□□□□□ -0.21
APOA1P02647 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 MIR4515-201ENST00000584082 81 ntBASIC13.74□□□□□ -0.21
APOA1P02647 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.74□□□□□ -0.21
APOA1P02647 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
APOA1P02647 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOA1P02647 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.74□□□□□ -0.21
APOA1P02647 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 AC105206.1-202ENST00000314927 2368 ntBASIC13.73□□□□□ -0.21
APOA1P02647 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 MEX3B-202ENST00000558133 4333 ntBASIC13.73□□□□□ -0.21
APOA1P02647 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.73□□□□□ -0.21
APOA1P02647 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.73□□□□□ -0.21
APOA1P02647 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.73□□□□□ -0.21
APOA1P02647 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.73□□□□□ -0.21
APOA1P02647 AP000867.3-201ENST00000524675 377 ntBASIC13.73□□□□□ -0.21
APOA1P02647 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.73□□□□□ -0.21
APOA1P02647 MIR4313-201ENST00000580760 101 ntBASIC13.73□□□□□ -0.21
APOA1P02647 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.73□□□□□ -0.21
APOA1P02647 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 MTDHP4-201ENST00000600287 670 ntBASIC13.73□□□□□ -0.21
APOA1P02647 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
APOA1P02647 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.73□□□□□ -0.21
APOA1P02647 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.73□□□□□ -0.21
APOA1P02647 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 MTHFR-210ENST00000641407 2387 ntBASIC13.73□□□□□ -0.21
APOA1P02647 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOA1P02647 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.73□□□□□ -0.21
APOA1P02647 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.73□□□□□ -0.21
APOA1P02647 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
APOA1P02647 AC015909.5-201ENST00000624336 2266 ntBASIC13.73□□□□□ -0.21
APOA1P02647 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.73□□□□□ -0.21
APOA1P02647 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.72□□□□□ -0.21
APOA1P02647 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOA1P02647 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.72□□□□□ -0.21
APOA1P02647 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms