Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA2P01906 WASH3P-207ENST00000560956 1394 ntBASIC13.83□□□□□ -0.19
HLA-DQA2P01906 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA2P01906 FO538757.1-201ENST00000623083 1397 ntBASIC13.83□□□□□ -0.19
HLA-DQA2P01906 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA2P01906 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA2P01906 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA2P01906 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA2P01906 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
HLA-DQA2P01906 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 AC013726.1-201ENST00000563747 2285 ntBASIC13.83□□□□□ -0.2
HLA-DQA2P01906 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 AL009178.2-201ENST00000597278 2719 ntBASIC13.83□□□□□ -0.2
HLA-DQA2P01906 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 LINC00628-201ENST00000628516 1289 ntBASIC13.83□□□□□ -0.2
HLA-DQA2P01906 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA2P01906 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 ZBED1P1-201ENST00000502364 1930 ntBASIC13.82□□□□□ -0.2
HLA-DQA2P01906 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.82□□□□□ -0.2
HLA-DQA2P01906 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA2P01906 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms