Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.81□□□□□ -0.04
CPNE3O75131 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CPNE3O75131 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CPNE3O75131 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.8□□□□□ -0.04
CPNE3O75131 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.8□□□□□ -0.04
CPNE3O75131 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.8□□□□□ -0.04
CPNE3O75131 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.8□□□□□ -0.04
CPNE3O75131 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CPNE3O75131 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 AP001063.1-201ENST00000568332 529 ntBASIC14.8□□□□□ -0.04
CPNE3O75131 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 MIR6775-201ENST00000617557 69 ntBASIC14.8□□□□□ -0.04
CPNE3O75131 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.8□□□□□ -0.04
CPNE3O75131 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPNE3O75131 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.79□□□□□ -0.04
CPNE3O75131 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CPNE3O75131 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 HLA-V-201ENST00000429037 534 ntBASIC14.79□□□□□ -0.04
CPNE3O75131 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE3O75131 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.79□□□□□ -0.04
CPNE3O75131 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 SNX29P1-201ENST00000548357 1007 ntBASIC14.79□□□□□ -0.04
CPNE3O75131 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 AC015910.1-201ENST00000579400 975 ntBASIC14.79□□□□□ -0.04
CPNE3O75131 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE3O75131 AC093813.1-201ENST00000605066 256 ntBASIC14.79□□□□□ -0.04
CPNE3O75131 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE3O75131 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CPNE3O75131 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CPNE3O75131 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CPNE3O75131 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE3O75131 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CPNE3O75131 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms