Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.08■□□□□ 0.17
OPHN1O60890 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
OPHN1O60890 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
OPHN1O60890 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.08■□□□□ 0.16
OPHN1O60890 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 AC092658.1-201ENST00000505836 891 ntBASIC16.08■□□□□ 0.16
OPHN1O60890 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.08■□□□□ 0.16
OPHN1O60890 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.08■□□□□ 0.16
OPHN1O60890 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
OPHN1O60890 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.08■□□□□ 0.16
OPHN1O60890 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
OPHN1O60890 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.08■□□□□ 0.16
OPHN1O60890 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
OPHN1O60890 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
OPHN1O60890 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 SNX18-202ENST00000343017 3140 ntBASIC16.07■□□□□ 0.16
OPHN1O60890 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 MEP1AP4-201ENST00000423244 1087 ntBASIC16.07■□□□□ 0.16
OPHN1O60890 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 AC245100.3-201ENST00000441281 285 ntBASIC16.07■□□□□ 0.16
OPHN1O60890 AC234783.1-201ENST00000441761 496 ntBASIC16.07■□□□□ 0.16
OPHN1O60890 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.07■□□□□ 0.16
OPHN1O60890 RN7SL837P-201ENST00000463010 287 ntBASIC16.07■□□□□ 0.16
OPHN1O60890 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 AC044860.1-202ENST00000559481 777 ntBASIC16.07■□□□□ 0.16
OPHN1O60890 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.07■□□□□ 0.16
OPHN1O60890 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.07■□□□□ 0.16
OPHN1O60890 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 MIR6069-201ENST00000620069 79 ntBASIC16.07■□□□□ 0.16
OPHN1O60890 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.07■□□□□ 0.16
OPHN1O60890 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
OPHN1O60890 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
OPHN1O60890 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
OPHN1O60890 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
OPHN1O60890 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
OPHN1O60890 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
OPHN1O60890 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.06■□□□□ 0.16
OPHN1O60890 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
OPHN1O60890 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
OPHN1O60890 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.06■□□□□ 0.16
OPHN1O60890 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms