Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.56□□□□□ -0.56
SNAI2O43623 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.56□□□□□ -0.56
SNAI2O43623 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 AC092910.1-201ENST00000482027 1129 ntBASIC11.56□□□□□ -0.56
SNAI2O43623 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.56□□□□□ -0.56
SNAI2O43623 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.56□□□□□ -0.56
SNAI2O43623 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.56□□□□□ -0.56
SNAI2O43623 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.56□□□□□ -0.56
SNAI2O43623 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.56□□□□□ -0.56
SNAI2O43623 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SNAI2O43623 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SNAI2O43623 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.56□□□□□ -0.56
SNAI2O43623 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.55□□□□□ -0.56
SNAI2O43623 WASH3P-207ENST00000560956 1394 ntBASIC11.55□□□□□ -0.56
SNAI2O43623 FO538757.1-201ENST00000623083 1397 ntBASIC11.55□□□□□ -0.56
SNAI2O43623 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SNAI2O43623 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SNAI2O43623 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.55□□□□□ -0.56
SNAI2O43623 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.55□□□□□ -0.56
SNAI2O43623 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SNAI2O43623 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.55□□□□□ -0.56
SNAI2O43623 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.55□□□□□ -0.56
SNAI2O43623 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.55□□□□□ -0.56
SNAI2O43623 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.55□□□□□ -0.56
SNAI2O43623 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SNAI2O43623 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 AL121912.1-201ENST00000603683 238 ntBASIC11.55□□□□□ -0.56
SNAI2O43623 SPTSSB-204ENST00000617024 1292 ntBASIC11.55□□□□□ -0.56
SNAI2O43623 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.55□□□□□ -0.56
SNAI2O43623 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SNAI2O43623 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms