Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.42□□□□□ -0.1
LRRTM2O43300 AC061975.2-201ENST00000581722 295 ntBASIC14.42□□□□□ -0.1
LRRTM2O43300 GPR182-203ENST00000622922 591 ntBASIC14.42□□□□□ -0.1
LRRTM2O43300 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 AC087481.3-201ENST00000602886 1894 ntBASIC14.42□□□□□ -0.1
LRRTM2O43300 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 CICP23-201ENST00000605013 2741 ntBASIC14.42□□□□□ -0.1
LRRTM2O43300 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM2O43300 CICP4-201ENST00000447359 2812 ntBASIC14.42□□□□□ -0.1
LRRTM2O43300 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM2O43300 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRTM2O43300 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LRRTM2O43300 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.41□□□□□ -0.1
LRRTM2O43300 ACTBP11-201ENST00000436287 1126 ntBASIC14.41□□□□□ -0.1
LRRTM2O43300 AC093724.1-201ENST00000448659 1027 ntBASIC14.41□□□□□ -0.1
LRRTM2O43300 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.41□□□□□ -0.1
LRRTM2O43300 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.41□□□□□ -0.1
LRRTM2O43300 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 BTNL10-201ENST00000595971 695 ntBASIC14.41□□□□□ -0.1
LRRTM2O43300 AC010319.3-201ENST00000597028 470 ntBASIC14.41□□□□□ -0.1
LRRTM2O43300 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM2O43300 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LRRTM2O43300 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM2O43300 AC090616.6-203ENST00000579186 1945 ntBASIC14.41□□□□□ -0.1
LRRTM2O43300 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM2O43300 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRTM2O43300 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 ANKRD19P-201ENST00000338192 862 ntBASIC14.4□□□□□ -0.1
LRRTM2O43300 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRTM2O43300 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM2O43300 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.4□□□□□ -0.1
LRRTM2O43300 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRTM2O43300 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRTM2O43300 AL139010.1-201ENST00000454878 894 ntBASIC14.4□□□□□ -0.1
LRRTM2O43300 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRTM2O43300 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRTM2O43300 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LRRTM2O43300 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRRTM2O43300 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM2O43300 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRRTM2O43300 OR2I1P-209ENST00000641730 5365 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms