Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.98□□□□□ -0.01
E2F3O00716 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
E2F3O00716 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 AC007686.3-201ENST00000619017 3487 ntBASIC14.97□□□□□ -0.01
E2F3O00716 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.97□□□□□ -0.01
E2F3O00716 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.97□□□□□ -0.01
E2F3O00716 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
E2F3O00716 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.97□□□□□ -0.01
E2F3O00716 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
E2F3O00716 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.97□□□□□ -0.01
E2F3O00716 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.97□□□□□ -0.01
E2F3O00716 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 AC009407.1-201ENST00000568958 598 ntBASIC14.97□□□□□ -0.01
E2F3O00716 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 AL391069.4-201ENST00000609583 481 ntBASIC14.97□□□□□ -0.01
E2F3O00716 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 AL158212.4-201ENST00000624062 1286 ntBASIC14.97□□□□□ -0.01
E2F3O00716 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
E2F3O00716 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.97□□□□□ -0.01
E2F3O00716 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
E2F3O00716 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
E2F3O00716 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.97□□□□□ -0.01
E2F3O00716 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
E2F3O00716 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.96□□□□□ -0.01
E2F3O00716 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
E2F3O00716 BTBD7P1-201ENST00000447253 1453 ntBASIC14.96□□□□□ -0.01
E2F3O00716 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.96□□□□□ -0.01
E2F3O00716 AC007191.1-201ENST00000623179 2995 ntBASIC14.96□□□□□ -0.01
E2F3O00716 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.96□□□□□ -0.01
E2F3O00716 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.96□□□□□ -0.01
E2F3O00716 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.96□□□□□ -0.01
E2F3O00716 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 TIMM17BP1-201ENST00000545713 516 ntBASIC14.96□□□□□ -0.01
E2F3O00716 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.96□□□□□ -0.01
E2F3O00716 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.96□□□□□ -0.01
E2F3O00716 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.96□□□□□ -0.01
E2F3O00716 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.96□□□□□ -0.01
E2F3O00716 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.96□□□□□ -0.01
E2F3O00716 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
E2F3O00716 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.96□□□□□ -0.01
E2F3O00716 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
E2F3O00716 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.96□□□□□ -0.02
E2F3O00716 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
E2F3O00716 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
E2F3O00716 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
E2F3O00716 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms