Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AP4M1O00189 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.78□□□□□ -0.36
AP4M1O00189 CDC14C-201ENST00000428251 1719 ntBASIC12.78□□□□□ -0.36
AP4M1O00189 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.78□□□□□ -0.36
AP4M1O00189 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.78□□□□□ -0.36
AP4M1O00189 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.78□□□□□ -0.36
AP4M1O00189 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP4M1O00189 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.78□□□□□ -0.36
AP4M1O00189 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP4M1O00189 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP4M1O00189 LINC02447-202ENST00000501888 2146 ntBASIC12.77□□□□□ -0.36
AP4M1O00189 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP4M1O00189 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP4M1O00189 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.77□□□□□ -0.36
AP4M1O00189 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.77□□□□□ -0.36
AP4M1O00189 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.77□□□□□ -0.36
AP4M1O00189 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.77□□□□□ -0.36
AP4M1O00189 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP4M1O00189 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP4M1O00189 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.77□□□□□ -0.36
AP4M1O00189 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.77□□□□□ -0.36
AP4M1O00189 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.77□□□□□ -0.37
AP4M1O00189 MIR943-201ENST00000401286 94 ntBASIC12.77□□□□□ -0.37
AP4M1O00189 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.77□□□□□ -0.37
AP4M1O00189 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.77□□□□□ -0.37
AP4M1O00189 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 MTND6P24-201ENST00000440466 518 ntBASIC12.77□□□□□ -0.37
AP4M1O00189 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.77□□□□□ -0.37
AP4M1O00189 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.77□□□□□ -0.37
AP4M1O00189 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.77□□□□□ -0.37
AP4M1O00189 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.77□□□□□ -0.37
AP4M1O00189 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.77□□□□□ -0.37
AP4M1O00189 AC105021.1-202ENST00000570572 669 ntBASIC12.77□□□□□ -0.37
AP4M1O00189 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.77□□□□□ -0.37
AP4M1O00189 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.77□□□□□ -0.37
AP4M1O00189 AL158211.3-201ENST00000607385 239 ntBASIC12.77□□□□□ -0.37
AP4M1O00189 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.77□□□□□ -0.37
AP4M1O00189 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.77□□□□□ -0.37
AP4M1O00189 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
AP4M1O00189 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
AP4M1O00189 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.77□□□□□ -0.37
AP4M1O00189 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
AP4M1O00189 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP4M1O00189 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.76□□□□□ -0.37
AP4M1O00189 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
AP4M1O00189 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP4M1O00189 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.76□□□□□ -0.37
AP4M1O00189 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP4M1O00189 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP4M1O00189 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP4M1O00189 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms