Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CCDC188H7C350 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC188H7C350 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CCDC188H7C350 MCCD1P2-201ENST00000423228 335 ntBASIC15.95■□□□□ 0.14
CCDC188H7C350 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC188H7C350 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CCDC188H7C350 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.95■□□□□ 0.14
CCDC188H7C350 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC188H7C350 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC188H7C350 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC188H7C350 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CCDC188H7C350 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC188H7C350 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC188H7C350 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 AC015922.1-201ENST00000421102 1152 ntBASIC15.94■□□□□ 0.14
CCDC188H7C350 KRT18P64-201ENST00000434946 1219 ntBASIC15.94■□□□□ 0.14
CCDC188H7C350 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
CCDC188H7C350 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC188H7C350 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC188H7C350 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC188H7C350 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.94■□□□□ 0.14
CCDC188H7C350 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 AC007967.4-201ENST00000614700 386 ntBASIC15.94■□□□□ 0.14
CCDC188H7C350 MIR6069-201ENST00000620069 79 ntBASIC15.94■□□□□ 0.14
CCDC188H7C350 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC188H7C350 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
CCDC188H7C350 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC188H7C350 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 AC010327.5-201ENST00000586923 3061 ntBASIC15.94■□□□□ 0.14
CCDC188H7C350 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CCDC188H7C350 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC188H7C350 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC188H7C350 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms