Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 MIR6074-201ENST00000612054 107 ntBASIC10.78□□□□□ -0.68
LINC01546A6NGU7 AC010507.1-201ENST00000633895 436 ntBASIC10.78□□□□□ -0.68
LINC01546A6NGU7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 CLK3P2-201ENST00000427566 1453 ntBASIC10.78□□□□□ -0.68
LINC01546A6NGU7 AL161772.1-201ENST00000610494 4412 ntBASIC10.78□□□□□ -0.68
LINC01546A6NGU7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 AP002761.4-201ENST00000565433 3361 ntBASIC10.77□□□□□ -0.68
LINC01546A6NGU7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01546A6NGU7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 AL121772.3-201ENST00000610840 674 ntBASIC10.77□□□□□ -0.69
LINC01546A6NGU7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 TP73-AS1-207ENST00000624167 988 ntBASIC10.77□□□□□ -0.69
LINC01546A6NGU7 AC008267.7-201ENST00000624570 1194 ntBASIC10.77□□□□□ -0.69
LINC01546A6NGU7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 KRT8P35-201ENST00000483942 1338 ntBASIC10.77□□□□□ -0.69
LINC01546A6NGU7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01546A6NGU7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms