Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.31■■□□□ 1
HRH3Q9Y5N1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HRH3Q9Y5N1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.3■■□□□ 1
HRH3Q9Y5N1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.3■■□□□ 1
HRH3Q9Y5N1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.3■■□□□ 1
HRH3Q9Y5N1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HRH3Q9Y5N1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.3■■□□□ 1
HRH3Q9Y5N1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HRH3Q9Y5N1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.29■■□□□ 1
HRH3Q9Y5N1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HRH3Q9Y5N1 AF131216.4-201ENST00000638924 1588 ntBASIC21.29■■□□□ 1
HRH3Q9Y5N1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.29■■□□□ 1
HRH3Q9Y5N1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.29■■□□□ 1
HRH3Q9Y5N1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
HRH3Q9Y5N1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HRH3Q9Y5N1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HRH3Q9Y5N1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.28■■□□□ 1
HRH3Q9Y5N1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HRH3Q9Y5N1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HRH3Q9Y5N1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.28■■□□□ 1
HRH3Q9Y5N1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.28■■□□□ 1
HRH3Q9Y5N1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.28■■□□□ 1
HRH3Q9Y5N1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.28■■□□□ 1
HRH3Q9Y5N1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HRH3Q9Y5N1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HRH3Q9Y5N1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.27■■□□□ 1
HRH3Q9Y5N1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.27■■□□□ 1
HRH3Q9Y5N1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.27■■□□□ 1
HRH3Q9Y5N1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.27■■□□□ 1
HRH3Q9Y5N1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.27■□□□□ 0.99
HRH3Q9Y5N1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HRH3Q9Y5N1 AC019069.1-201ENST00000610008 1333 ntBASIC21.27■□□□□ 0.99
HRH3Q9Y5N1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HRH3Q9Y5N1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HRH3Q9Y5N1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HRH3Q9Y5N1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HRH3Q9Y5N1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
HRH3Q9Y5N1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.26■□□□□ 0.99
HRH3Q9Y5N1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HRH3Q9Y5N1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HRH3Q9Y5N1 TSPY9P-201ENST00000440215 945 ntBASIC21.25■□□□□ 0.99
HRH3Q9Y5N1 TSPY11P-201ENST00000442607 1045 ntBASIC21.25■□□□□ 0.99
HRH3Q9Y5N1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HRH3Q9Y5N1 AC008406.3-201ENST00000620001 1374 ntBASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 KRT16P3-201ENST00000439127 1283 ntBASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 AC142381.3-201ENST00000568208 1670 ntBASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HRH3Q9Y5N1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 AC092028.1-203ENST00000608262 953 ntBASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.23■□□□□ 0.99
HRH3Q9Y5N1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HRH3Q9Y5N1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HRH3Q9Y5N1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HRH3Q9Y5N1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.22■□□□□ 0.99
HRH3Q9Y5N1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HRH3Q9Y5N1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HRH3Q9Y5N1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HRH3Q9Y5N1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HRH3Q9Y5N1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.21■□□□□ 0.99
HRH3Q9Y5N1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
HRH3Q9Y5N1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HRH3Q9Y5N1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HRH3Q9Y5N1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HRH3Q9Y5N1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HRH3Q9Y5N1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HRH3Q9Y5N1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HRH3Q9Y5N1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HRH3Q9Y5N1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.19■□□□□ 0.98
HRH3Q9Y5N1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.19■□□□□ 0.98
HRH3Q9Y5N1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.18■□□□□ 0.98
HRH3Q9Y5N1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.18■□□□□ 0.98
HRH3Q9Y5N1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.18■□□□□ 0.98
HRH3Q9Y5N1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HRH3Q9Y5N1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HRH3Q9Y5N1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HRH3Q9Y5N1 HLA-L-211ENST00000482052 1765 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms