Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.23■■□□□ 1.31
TCAF1Q9Y4C2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 AL033527.3-201ENST00000566366 1196 ntBASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
TCAF1Q9Y4C2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCAF1Q9Y4C2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCAF1Q9Y4C2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 AC120024.1-201ENST00000562672 995 ntBASIC23.19■■□□□ 1.3
TCAF1Q9Y4C2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TCAF1Q9Y4C2 AL161729.1-201ENST00000604104 1402 ntBASIC23.17■■□□□ 1.3
TCAF1Q9Y4C2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCAF1Q9Y4C2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCAF1Q9Y4C2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.17■■□□□ 1.3
TCAF1Q9Y4C2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCAF1Q9Y4C2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCAF1Q9Y4C2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TCAF1Q9Y4C2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCAF1Q9Y4C2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCAF1Q9Y4C2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TCAF1Q9Y4C2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCAF1Q9Y4C2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.14■■□□□ 1.29
TCAF1Q9Y4C2 KRT18P24-201ENST00000344739 1156 ntBASIC23.14■■□□□ 1.29
TCAF1Q9Y4C2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
TCAF1Q9Y4C2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.14■■□□□ 1.29
TCAF1Q9Y4C2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
TCAF1Q9Y4C2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCAF1Q9Y4C2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 MIR4508-201ENST00000584178 70 ntBASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 THA1P-201ENST00000590384 1145 ntBASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCAF1Q9Y4C2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms